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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015914544.1_cds_XP_016464539.1_57571
CDS Infomation

[gene=LOC107787472] [db_xref=GeneID:107787472] [protein=probable 2-oxoglutarate-dependent dioxygenase AOP1] [protein_id=XP_016464539.1] [location=join(1066..1442,2161..2482,3393..3641)] [gbkey=CDS]
Sequence

ATGGATTCTCTAACTGTTTTCCACAAACTTCCCATAATTGATTTCACAAAAGAGAATTTA
GAACCAGGCACAAATTCATGGTTCAAGGTATGTAAAGAAGTTGTTTGTGCTCTTGAAGAG
TATGGTTGTTTTGTAGCATTGTATGATAAAATTTCATTAAAGATACATAATGAAGTTTTT
CAAGCACTAGAGGAGTTATTTAATCTTCCCACTCAGACAAAAATCCAGAATAAATCTACC
AAACCTTTGTATGGTTATGTTGGCCAAATCCCATTTATTCCTCTCTATGAGAGTATGGGC
ATTGATAATGCTAATACAATTGAAGGAATCCAAAATTTCTCCAATTTCATGTGGCCTAAT
GGAAACAATTGTTTCAGTGAAGCTTTGCTAGCATACTCGAAAGCAGCAGCAGAAGTAGAA
GAAATGGTGGTGAGAATGGTATTTGAGAGCTATGGTGTAGAAAAATACTATGAATCTCAC
ATCAAATCAGTGAATTATCTTGCTAGGGTTATGAAATATAAAGAAGCCCAAGTACAAGAA
CCAAAACTTGGATTTGTTGCTCATACAGACAAGAGCTTCATGTCTACAATTCATCAGAAT
CAAGTTAATGGTTTGGAGATCAAAGGGAAAGATGGTCAGTGGTTTGGAGTTGAGCTTTCC
CCTTCCTCCATTGTGGTCATGGCTGGCGACGCAATCATGGCATGGAGCAATAACAGGATA
AAATCTCCACATCATAGAGTGATGATGGAAGGGAAGGGAGAAAGATATTCCATTGCCCAA
TTTTCTTTCATGGAAGATACAGTAATGGTTGAAACACCAGAAGAGCTTGTTGATGAAGAG
CACCCCTTAAAGTTCAAGTCATTCAACCATCTTGATTATCTTCATTTCTTTAGCAAAGAG
GAAAATAGAAGGCTGGAGTCTGCTCTCAAAACCTATTGTGGTGTTTGA

Peptide Sequence

PEP ID

XP_016464539.1
PEP Infomation

PREDICTED: probable 2-oxoglutarate-dependent dioxygenase AOP1 [Nicotiana tabacum]
Sequence

MDSLTVFHKLPIIDFTKENLEPGTNSWFKVCKEVVCALEEYGCFVALYDKISLKIHNEVF
QALEELFNLPTQTKIQNKSTKPLYGYVGQIPFIPLYESMGIDNANTIEGIQNFSNFMWPN
GNNCFSEALLAYSKAAAEVEEMVVRMVFESYGVEKYYESHIKSVNYLARVMKYKEAQVQE
PKLGFVAHTDKSFMSTIHQNQVNGLEIKGKDGQWFGVELSPSSIVVMAGDAIMAWSNNRI
KSPHHRVMMEGKGERYSIAQFSFMEDTVMVETPEELVDEEHPLKFKSFNHLDYLHFFSKE
ENRRLESALKTYCGV

Transcript Sequence

Gene sequence data has not been registered.